Slot: sequence_md5
The pre-computed hash uniquely representing a biological sequence. Calculated as the MD5 of the upper-case sequence excluding all whitespace characters (this is equivalent to SQ:M5 in SAM).
URI: modos:sequence_md5
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| ReferenceSequence | A contiguous sequence of DNA part of a reference coordinate system (genome as... | no |
Properties
-
Range: String
-
Regex pattern:
^[a-f0-9]{32}$
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/sdsc-ordes/modos-schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | modos:sequence_md5 |
| native | modos:sequence_md5 |
LinkML Source
name: sequence_md5
description: The pre-computed hash uniquely representing a biological sequence. Calculated
as the MD5 of the upper-case sequence excluding all whitespace characters (this
is equivalent to SQ:M5 in SAM).
from_schema: https://w3id.org/sdsc-ordes/modos-schema
rank: 1000
alias: sequence_md5
domain_of:
- ReferenceSequence
range: string
pattern: ^[a-f0-9]{32}$